MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Muribacter muris
7_18CXCR221ANO_S7
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 132
bases: 2,528,057 bps
CDS: 2,432
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 54
misc RNA:
Total features: 2,493
Total number of protein coding genes annotated/found:
2,432
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5049|JADGLQ010000119.1
SEQF5049_02411
Genome Viewer
NA
AA
921/307
289714-290634
Protein FdhE
SEQF5049|JADGLQ010000119.1
SEQF5049_02410
Genome Viewer
NA
AA
678/226
288933-289610
Formate dehydrogenase%2C nitrate-inducible%2C cytochrome b556(Fdn) subunit
SEQF5049|JADGLQ010000119.1
SEQF5049_02409
Genome Viewer
NA
AA
897/299
288044-288940
Formate dehydrogenase%2C nitrate-inducible%2C iron-sulfur subunit
SEQF5049|JADGLQ010000119.1
SEQF5049_02408
Genome Viewer
NA
AA
2469/823
285575-288043
Formate dehydrogenase%2C nitrate-inducible%2C major subunit
SEQF5049|JADGLQ010000119.1
SEQF5049_02407
Genome Viewer
NA
AA
588/196
284975-285562
Formate dehydrogenase%2C nitrate-inducible%2C major subunit
SEQF5049|JADGLQ010000119.1
SEQF5049_02406
Genome Viewer
NA
AA
810/270
284744-283935
Sulfur carrier protein FdhD
SEQF5049|JADGLQ010000119.1
SEQF5049_02405
Genome Viewer
NA
AA
1392/464
282502-283893
Protein YdgA
SEQF5049|JADGLQ010000119.1
SEQF5049_02404
Genome Viewer
NA
AA
2124/708
280310-282433
Fatty acid oxidation complex subunit alpha
SEQF5049|JADGLQ010000119.1
SEQF5049_02403
Genome Viewer
NA
AA
1305/435
278996-280300
3-ketoacyl-CoA thiolase FadI
SEQF5049|JADGLQ010000119.1
SEQF5049_02402
Genome Viewer
NA
AA
1485/495
278772-277288
hypothetical protein
SEQF5049|JADGLQ010000119.1
SEQF5049_02401
Genome Viewer
NA
AA
648/216
277151-276504
hypothetical protein
SEQF5049|JADGLQ010000119.1
SEQF5049_02400
Genome Viewer
NA
AA
966/322
275982-275017
Pantothenate precursors transporter PanS
SEQF5049|JADGLQ010000119.1
SEQF5049_02399
Genome Viewer
NA
AA
870/290
274687-273818
Acyl-CoA thioesterase 2
SEQF5049|JADGLQ010000119.1
SEQF5049_02398
Genome Viewer
NA
AA
963/321
273389-272427
tRNA U34 carboxymethyltransferase
SEQF5049|JADGLQ010000119.1
SEQF5049_02397
Genome Viewer
NA
AA
1539/513
270884-272422
Phosphoethanolamine transferase OpgE
SEQF5049|JADGLQ010000119.1
SEQF5049_02396
Genome Viewer
NA
AA
714/238
270743-270030
Uridylate kinase
SEQF5049|JADGLQ010000104.1
SEQF5049_01724
Genome Viewer
NA
AA
1191/397
270215-271405
Cysteine desulfurase CsdA
SEQF5049|JADGLQ010000119.1
SEQF5049_02395
Genome Viewer
NA
AA
1596/532
269867-268272
Transcriptional regulatory protein TyrR
SEQF5049|JADGLQ010000104.1
SEQF5049_01723
Genome Viewer
NA
AA
708/236
269511-270218
hypothetical protein
SEQF5049|JADGLQ010000104.1
SEQF5049_01722
Genome Viewer
NA
AA
1248/416
269405-268158
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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